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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
372
total RNA-seq
215
ChIP-seq
134
ATAC-seq
18
pCHi-C
1
DNAme array
Assay category
215
DNA binding
Target of assay
167
histone
167
histone modification
91
narrow histone mark
76
broad histone mark
32
control
16
transcription factor
5
RNA binding protein
Date released
391
November, 2017
293
August, 2017
241
October, 2019
165
May, 2021
120
May, 2019
91
December, 2017
80
April, 2019
74
October, 2018
63
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
32
December, 2018
32
September, 2018
31
June, 2019
24
February, 2018
19
January, 2019
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
150
bigWig
147
bed narrowPeak
141
bam
140
tagAlign
Organism
215
Homo sapiens
Biosample type
121
primary cell
50
tissue
43
in vitro differentiated cells
1
cell line
Organ
50
liver
4
epithelium
4
pancreas
Project
130
AMP
85
T1D
Genome assembly (visualization)
150
hg19
109
GRCh38
Lab
154
Kyle Gaulton, UCSD
61
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
tagAlign bed3+
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
215 results
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Clear Filters
ChIP-seq
primary cell
monocyte
85
CD8-positive, alpha-beta T cell
33
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
1
tissue
liver
50
in vitro differentiated cells
embryonic stem cell
37
cardiomyocytes
3
pancreatic PP cell
3
cell line
EndoC_BH1
1
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