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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
190
DNA binding
Target of assay
92
histone
92
histone modification
69
transcription factor
58
broad histone mark
34
narrow histone mark
29
control
26
RNA binding protein
16
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
392
November, 2017
219
October, 2019
181
August, 2017
120
May, 2019
94
December, 2017
91
May, 2021
79
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
August, 2021
24
February, 2018
13
November, 2019
8
February, 2021
8
October, 2017
6
September, 2017
3
March, 2020
Available data
190
bam
160
bed narrowPeak
160
bigBed narrowPeak
160
bigWig
70
fastq
Organism
190
Homo sapiens
Biosample type
125
tissue
60
cell line
5
primary cell
Organ
50
blood vessel
50
vasculature
49
liver
28
brain
21
heart
15
blood
15
bodily fluid
7
limb
7
musculature of body
6
spleen
5
artery
5
epithelium
5
kidney
2
pancreas
Project
190
AMP
Genome assembly (visualization)
159
GRCh38
158
hg19
Lab
190
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
190 results
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ChIP-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 8 more…
cell line
HepG2
45
GM12878
15
primary cell
kidney epithelial cell
5
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