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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
197
DNase-seq
48
ChIP-seq
2
ATAC-seq
Assay category
48
DNA binding
Target of assay
62
histone
histone modification
48
transcription factor
34
broad histone mark
28
narrow histone mark
8
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
46
November, 2017
2
August, 2017
Available data
764
bam
625
fastq
512
bigWig
466
bed narrowPeak
406
bigBed narrowPeak
71
tagAlign
48
bed broadPeak
48
bigBed broadPeak
28
bed bed3+
3
tar
Organism
48
Homo sapiens
Biosample type
44
cell line
4
primary cell
Organ
44
liver
3
brain
2
epithelium
2
vasculature
blood vessel
Project
48
AMP
Genome assembly (visualization)
48
hg19
35
GRCh38
Lab
48
AMP-T2D consortium
Audit category:
2
inconsistent control read length
organ_slims!
blood vessel
ovary
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
48 results
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ChIP-seq
cell line
HepG2
44
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
choroid plexus epithelial cell
1
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