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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
DNase-seq
47
ChIP-seq
2
ATAC-seq
Assay category
47
DNA binding
Target of assay
histone
61
histone modification
47
transcription factor
34
broad histone mark
27
narrow histone mark
7
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
45
November, 2017
2
August, 2017
Available data
763
bam
624
fastq
511
bigWig
466
bed narrowPeak
405
bigBed narrowPeak
71
tagAlign
47
bed broadPeak
47
bigBed broadPeak
28
bed bed3+
3
tar
Organism
47
Homo sapiens
Biosample type
44
cell line
3
primary cell
Organ
44
liver
3
brain
2
epithelium
vasculature
1
blood vessel
Project
47
AMP
Genome assembly (visualization)
47
hg19
34
GRCh38
Lab
47
AMP-T2D consortium
Audit category:
2
inconsistent control read length
organ_slims!
vasculature
target.investigated_as!
histone
nucleotide modification
BIOSAMPLE
ASSAY
47 results
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ChIP-seq
cell line
HepG2
44
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
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