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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
76
ATAC-seq
53
ChIP-seq
Assay category
53
DNA binding
Target of assay
38
histone
38
histone modification
22
narrow histone mark
16
broad histone mark
15
transcription factor
5
RNA binding protein
Date released
313
November, 2017
174
October, 2019
132
August, 2017
120
May, 2021
97
May, 2019
72
December, 2017
65
April, 2019
63
November, 2018
45
October, 2018
40
May, 2024
32
September, 2018
30
August, 2021
30
December, 2018
27
May, 2020
23
June, 2019
21
January, 2019
16
February, 2018
11
November, 2019
6
October, 2017
5
February, 2021
3
March, 2020
Available data
55
bam
53
bed narrowPeak
53
bigWig
24
tagAlign
23
bigBed narrowPeak
3
bed bed3+
Organism
53
Homo sapiens
Biosample type
26
primary cell
14
cell line
13
in vitro differentiated cells
Organ
17
liver
9
connective tissue
8
musculature of body
7
epithelium
3
heart
2
eye
2
kidney
Project
53
AMP
Genome assembly (visualization)
52
hg19
39
GRCh38
Lab
39
AMP-T2D consortium
14
Bing Ren, UCSD
Audit category:
18
inconsistent ontology term
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
53 results
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ChIP-seq
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
3
hepatocyte
3
cardiac muscle cell
2
+ See 3 more…
cell line
HepG2
14
in vitro differentiated cells
neural progenitor cell
13
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