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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
5
ATAC-seq
4
DNase-seq
1
FAIRE-seq
Assay category
53
DNA binding
Target of assay
37
histone
37
histone modification
22
broad histone mark
16
transcription factor
15
narrow histone mark
8
RNA binding protein
7
chromatin remodeller
Date released
312
November, 2017
97
May, 2019
64
April, 2019
63
November, 2018
58
October, 2019
50
December, 2017
45
October, 2018
32
August, 2017
30
December, 2018
23
June, 2019
21
January, 2019
6
October, 2017
Available data
206
bam
206
fastq
192
bigWig
153
bed narrowPeak
85
tagAlign
53
bigBed narrowPeak
39
bed broadPeak
33
bed bed3+
13
bigBed broadPeak
Organism
47
Homo sapiens
Biosample type
24
tissue
15
cell line
14
primary cell
Organ
15
blood
15
bodily fluid
12
pancreas
6
spleen
5
liver
1
adipose tissue
1
connective tissue
Project
53
AMP
Genome assembly (visualization)
53
hg19
52
GRCh38
Lab
53
AMP-T2D consortium
Audit category:
6
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
month_released!
June, 2018
BIOSAMPLE
ASSAY
53 results
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ChIP-seq
tissue
pancreas
12
spleen
6
liver
5
adipose tissue
1
cell line
GM12878
15
primary cell
skeletal muscle myoblast
14
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