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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
352
ChIP-seq
5
DNase-seq
1
ATAC-seq
Assay category
352
DNA binding
Target of assay
314
transcription factor
81
recombinant protein
55
RNA binding protein
35
histone
35
histone modification
23
chromatin remodeller
21
broad histone mark
14
narrow histone mark
2
other context
2
other post-translational modification
Date released
249
November, 2017
50
December, 2017
48
November, 2018
5
August, 2017
Available data
510
bam
452
fastq
432
bigWig
413
bed narrowPeak
352
bigBed narrowPeak
86
tagAlign
58
bed broadPeak
58
bigBed broadPeak
6
bed bed3+
3
tar
Organism
352
Homo sapiens
Biosample type
293
cell line
45
tissue
14
in vitro differentiated cells
Organ
352
liver
94
brain
71
vasculature
69
blood vessel
64
heart
59
pancreas
54
blood
54
bodily fluid
48
limb
36
epithelium
24
kidney
nerve
21
artery
15
connective tissue
14
musculature of body
12
spleen
10
vein
6
adipose tissue
2
eye
Project
352
AMP
Genome assembly (visualization)
348
hg19
320
GRCh38
Lab
352
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
12
missing controlled_by
Audit category:
25
inconsistent control read length
8
inconsistent control run_type
organ_slims!
nerve
BIOSAMPLE
ASSAY
352 results
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Clear Filters
ChIP-seq
cell line
HepG2
293
tissue
liver
38
right lobe of liver
7
in vitro differentiated cells
hepatocyte
14
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