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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
176
ChIP-seq
16
total RNA-seq
10
ATAC-seq
8
DNase-seq
1
FAIRE-seq
1
Hi-C
Assay category
176
DNA binding
Target of assay
169
histone
169
histone modification
117
narrow histone mark
52
broad histone mark
7
recombinant protein
7
transcription factor
Date released
334
November, 2017
176
October, 2019
171
August, 2017
123
May, 2021
97
May, 2019
72
December, 2017
65
April, 2019
63
November, 2018
45
October, 2018
40
May, 2024
32
September, 2018
30
August, 2021
30
December, 2018
27
May, 2020
23
June, 2019
21
January, 2019
16
February, 2018
11
November, 2019
6
October, 2017
5
February, 2021
3
March, 2020
0
September, 2017
Available data
225
bam
176
bigWig
174
bed narrowPeak
58
bigBed narrowPeak
49
tagAlign
6
fastq
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
tagAlign bed3+
Organism
176
Homo sapiens
Biosample type
145
tissue
18
primary cell
13
cell line
Organ
75
brain
42
limb
30
blood vessel
30
vasculature
24
nerve
18
artery
18
epithelium
15
kidney
12
vein
6
pancreas
5
heart
5
liver
1
pituitary gland
Project
176
AMP
Genome assembly (visualization)
176
hg19
174
GRCh38
Lab
176
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
organ_slims!
ureter
BIOSAMPLE
ASSAY
176 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
24
tibial artery
18
brain
5
heart
5
liver
5
+ See 74 more…
primary cell
endothelial cell of umbilical vein
12
epithelial cell of proximal tubule
6
cell line
Panc1
6
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
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