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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
105
ChIP-seq
1
DNase-seq
Assay category
105
DNA binding
Target of assay
52
transcription factor
38
histone
38
histone modification
20
narrow histone mark
18
broad histone mark
15
control
13
RNA binding protein
1
chromatin remodeller
1
other context
1
other post-translational modification
Date released
58
November, 2017
43
August, 2017
2
October, 2018
2
September, 2017
Available data
105
bam
105
fastq
100
bigWig
90
bed narrowPeak
51
bigBed narrowPeak
12
bed bed3+
9
bed broadPeak
8
bigBed broadPeak
3
tar
1
tagAlign
Organism
104
Homo sapiens
Biosample type
51
cell line
31
in vitro differentiated cells
15
tissue
8
primary cell
Organ
53
liver
31
connective tissue
13
pancreas
7
brain
4
epithelium
4
vasculature
2
blood vessel
Project
105
AMP
Genome assembly (visualization)
103
hg19
72
GRCh38
Lab
105
AMP-T2D consortium
Audit category:
6
missing controlled_by
BIOSAMPLE
ASSAY
105 results
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ChIP-seq
cell line
HepG2
51
in vitro differentiated cells
adipocyte
31
tissue
islet of Langerhans
10
pancreas
3
liver
2
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
skeletal muscle myoblast
1
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