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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
46
ChIP-seq
8
ATAC-seq
Assay category
46
DNA binding
Target of assay
31
histone
31
histone modification
18
broad histone mark
13
narrow histone mark
11
control
4
RNA binding protein
4
transcription factor
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
39
bam
29
bed narrowPeak
29
bigBed narrowPeak
29
bigWig
14
tagAlign
9
fastq
3
bed broadPeak
Organism
46
Homo sapiens
Biosample type
31
primary cell
15
tissue
Organ
15
brain
12
connective tissue
10
musculature of body
6
epithelium
5
heart
3
eye
3
kidney
Project
46
AMP
Genome assembly (visualization)
29
GRCh38
29
hg19
Lab
46
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
4
missing controlled_by
lab.title!
Katalin Susztak, Upenn
Maike Sander, UCSD
BIOSAMPLE
ASSAY
46 results
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Clear Filters
ChIP-seq
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
5
cardiac muscle cell
3
epithelial cell of proximal tubule
3
+ See 2 more…
tissue
brain
15
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