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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
76
ATAC-seq
74
total RNA-seq
31
ChIP-seq
6
snATAC-seq
5
STARR-seq
4
Capture-C
3
Hi-C
1
RNA microarray
1
whole genome sequencing assay
Assay category
31
DNA binding
Target of assay
20
histone
20
histone modification
control
11
narrow histone mark
11
transcription factor
9
broad histone mark
1
RNA binding protein
Date released
335
November, 2017
246
August, 2017
203
October, 2019
156
May, 2021
97
May, 2019
73
December, 2017
66
April, 2019
64
November, 2018
45
October, 2018
40
May, 2024
32
September, 2018
31
August, 2021
30
December, 2018
27
May, 2020
23
June, 2019
21
January, 2019
16
February, 2018
12
October, 2017
11
November, 2019
5
February, 2021
3
March, 2020
Available data
30
bed narrowPeak
30
bigWig
16
bam
16
tagAlign
3
bed bed3+
Organism
31
Homo sapiens
Biosample type
14
cell line
14
in vitro differentiated cells
3
primary cell
Organ
17
liver
3
epithelium
Project
31
AMP
Genome assembly (visualization)
29
hg19
16
GRCh38
Lab
17
AMP-T2D consortium
14
Bing Ren, UCSD
lab.title!
Klaus Kaestner, Upenn
target.investigated_as!
control
BIOSAMPLE
ASSAY
31 results
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Clear Filters
ChIP-seq
cell line
HepG2
14
in vitro differentiated cells
neural progenitor cell
14
primary cell
hepatocyte
3
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