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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
93
single cell RNA-seq
72
total RNA-seq
47
ATAC-seq
30
DNase-seq
8
WGBS
3
Hi-C
3
pCHi-C
2
RRBS
1
small RNA-seq
Assay category
114
DNA binding
Target of assay
97
histone
97
histone modification
57
broad histone mark
40
narrow histone mark
control
17
transcription factor
11
RNA binding protein
Date released
47
April, 2019
40
May, 2024
15
May, 2019
5
October, 2019
4
February, 2021
3
June, 2019
Available data
114
bed narrowPeak
114
bigWig
73
bam
64
bigBed narrowPeak
4
tagAlign
Organism
114
Homo sapiens
Biosample type
107
tissue
4
cell line
3
primary cell
Organ
444
liver
190
brain
170
pancreas
118
connective tissue
114
heart
102
epithelium
80
vasculature
78
blood vessel
54
blood
54
bodily fluid
49
adipose tissue
49
limb
40
kidney
33
musculature of body
25
artery
24
nerve
15
embryo
15
vein
12
spleen
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
114
AMP
Genome assembly (visualization)
113
GRCh38
74
hg19
Lab
74
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
3
inconsistent ontology term
lab.title!
Xin Sun, UCSD
target.investigated_as!
control
BIOSAMPLE
ASSAY
114 results
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Clear Filters
ChIP-seq
tissue
left cardiac atrium
40
heart left ventricle
29
heart
12
heart right ventricle
11
right atrium auricular region
7
+ See 2 more…
cell line
smooth muscle cell of the coronary artery
4
primary cell
cardiac fibroblast
3
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