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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ChIP-seq
Assay category
84
DNA binding
Target of assay
334
transcription factor
100
control
84
histone
84
histone modification
82
recombinant protein
58
RNA binding protein
53
narrow histone mark
31
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
August, 2017
27
May, 2020
17
December, 2017
15
November, 2017
8
June, 2019
6
August, 2021
6
May, 2019
5
October, 2019
Available data
84
bigWig
82
bed narrowPeak
81
bam
44
bigBed narrowPeak
41
tagAlign
32
fastq
14
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
84
Homo sapiens
Biosample type
43
tissue
18
cell line
12
in vitro differentiated cells
11
primary cell
Organ
187
brain
97
heart
85
pancreas
79
epithelium
71
vasculature
70
blood vessel
70
liver
49
limb
30
kidney
24
nerve
20
artery
15
vein
14
musculature of body
12
embryo
9
connective tissue
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
84
AMP
Genome assembly (visualization)
84
hg19
70
GRCh38
Lab
81
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
7
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
month_released!
August, 2017
BIOSAMPLE
ASSAY
84 results
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Clear Filters
ChIP-seq
tissue
liver
32
muscle of leg
6
right lobe of liver
5
cell line
HepG2
18
in vitro differentiated cells
hepatocyte
12
primary cell
skeletal muscle satellite cell
7
hepatocyte
3
skeletal muscle cell
1
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