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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
29
ATAC-seq
19
total RNA-seq
8
snATAC-seq
4
DNase-seq
4
pCHi-C
1
RRBS
Assay category
47
DNA binding
Target of assay
38
transcription factor
5
RNA binding protein
4
chromatin remodeller
4
control
3
histone
3
histone modification
3
narrow histone mark
Date released
27
December, 2018
January, 2019
15
November, 2018
3
June, 2019
2
October, 2019
Available data
45
bam
42
fastq
41
bed narrowPeak
41
bigBed narrowPeak
41
bigWig
Organism
47
Homo sapiens
Biosample type
42
cell line
3
primary cell
2
tissue
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
52
kidney
42
blood
42
bodily fluid
39
musculature of body
35
nerve
34
artery
22
embryo
17
vein
13
spleen
5
eye
4
gonad
4
ovary
1
lymph node
pituitary gland
Project
47
AMP
Genome assembly (visualization)
41
GRCh38
41
hg19
Lab
47
AMP-T2D consortium
Audit category:
1
inconsistent control
month_released!
January, 2019
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
47 results
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Clear Filters
ChIP-seq
cell line
GM12878
42
primary cell
retinal pigment epithelial cell
3
tissue
islet of Langerhans
2
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