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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
64
single cell RNA-seq
60
total RNA-seq
44
ChIP-seq
6
snATAC-seq
4
RRBS
3
DNase-seq
3
snDrop-seq
2
RNA microarray
2
STARR-seq
2
pCHi-C
1
FAIRE-seq
1
Hi-C
1
small RNA-seq
Assay category
44
DNA binding
Target of assay
26
histone
26
histone modification
13
broad histone mark
13
narrow histone mark
10
control
8
transcription factor
7
recombinant protein
1
RNA binding protein
Date released
23
April, 2019
21
October, 2019
May, 2019
June, 2019
Available data
44
bam
33
bed narrowPeak
33
bigWig
18
bigBed narrowPeak
Organism
44
Homo sapiens
Biosample type
27
tissue
10
cell line
7
primary cell
Organ
552
liver
216
pancreas
190
brain
141
connective tissue
118
epithelium
108
heart
73
adipose tissue
60
blood
60
bodily fluid
59
limb
52
vasculature
49
blood vessel
44
kidney
35
nerve
29
artery
22
embryo
22
musculature of body
20
spleen
17
vein
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
44
AMP
Genome assembly (visualization)
33
GRCh38
33
hg19
Lab
44
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
month_released!
June, 2019
May, 2019
BIOSAMPLE
ASSAY
44 results
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Clear Filters
ChIP-seq
tissue
kidney
27
cell line
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
primary cell
epithelial cell of proximal tubule
7
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