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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
182
total RNA-seq
45
ChIP-seq
34
ATAC-seq
17
pCHi-C
1
DNAme array
Assay category
45
DNA binding
Target of assay
histone
200
histone modification
113
broad histone mark
87
narrow histone mark
23
control
22
transcription factor
9
RNA binding protein
Date released
318
November, 2017
98
August, 2017
70
November, 2018
63
December, 2017
46
October, 2019
44
October, 2018
34
December, 2018
28
May, 2019
25
May, 2021
23
August, 2021
23
May, 2020
20
April, 2019
18
January, 2019
12
June, 2019
8
February, 2018
8
February, 2021
6
September, 2017
5
May, 2024
3
November, 2019
3
October, 2017
Available data
25
bam
12
bigWig
9
bed narrowPeak
5
bigBed narrowPeak
5
tagAlign
Organism
45
Homo sapiens
Biosample type
22
in vitro differentiated cells
20
tissue
3
primary cell
Organ
15
heart
5
kidney
2
epithelium
2
pancreas
Project
45
AMP
Genome assembly (visualization)
12
hg19
9
GRCh38
Lab
25
AMP-T2D consortium
20
Kyle Gaulton, UCSD
Audit category:
3
inconsistent ontology term
target.investigated_as!
histone
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
in vitro differentiated cells
embryonic stem cell
17
cardiomyocytes
3
pancreatic PP cell
2
tissue
heart left ventricle
11
kidney
5
heart
2
heart right ventricle
2
primary cell
CD8-positive, alpha-beta T cell
3
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