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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
282
ChIP-seq
30
total RNA-seq
21
ATAC-seq
6
DNase-seq
4
Hi-C
4
pCHi-C
Assay category
282
DNA binding
Target of assay
223
histone
223
histone modification
154
narrow histone mark
69
broad histone mark
46
control
13
transcription factor
7
recombinant protein
4
RNA binding protein
Date released
403
November, 2017
296
August, 2017
202
October, 2019
165
May, 2021
94
December, 2017
80
April, 2019
74
October, 2018
70
May, 2019
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
6
September, 2017
3
March, 2020
2
February, 2021
Available data
258
bam
211
bed narrowPeak
211
bigWig
94
bigBed narrowPeak
49
tagAlign
1
tagAlign bed3+
Organism
282
Homo sapiens
Biosample type
252
tissue
23
cell line
7
primary cell
Organ
84
brain
62
heart
59
limb
44
kidney
blood vessel
40
vasculature
35
nerve
24
epithelium
23
artery
17
vein
13
pancreas
5
liver
4
gonad
4
ovary
2
eye
1
connective tissue
1
lymph node
1
pituitary gland
Project
282
AMP
Genome assembly (visualization)
213
hg19
212
GRCh38
Lab
282
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
month_released!
September, 2020
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
282 results
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Clear Filters
ChIP-seq
tissue
heart left ventricle
35
tibial nerve
35
kidney
27
islet of Langerhans
21
heart
14
+ See 78 more…
cell line
Panc1
13
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
primary cell
epithelial cell of proximal tubule
7
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