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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
322
ChIP-seq
30
total RNA-seq
22
ATAC-seq
10
DNase-seq
5
Hi-C
4
pCHi-C
1
FAIRE-seq
Assay category
322
DNA binding
Target of assay
256
histone
256
histone modification
164
narrow histone mark
92
broad histone mark
53
control
13
transcription factor
7
recombinant protein
4
RNA binding protein
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
298
bam
241
bigWig
239
bed narrowPeak
122
bigBed narrowPeak
49
tagAlign
2
bed broadPeak
2
bigBed broadPeak
1
tagAlign bed3+
Organism
322
Homo sapiens
Biosample type
275
tissue
24
primary cell
23
cell line
Organ
84
brain
62
heart
59
limb
44
kidney
40
blood vessel
40
vasculature
35
nerve
24
epithelium
23
artery
17
vein
13
pancreas
5
liver
4
gonad
4
ovary
2
eye
1
connective tissue
1
lymph node
1
pituitary gland
Project
322
AMP
Genome assembly (visualization)
243
hg19
240
GRCh38
Lab
322
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
BIOSAMPLE
ASSAY
322 results
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Clear Filters
ChIP-seq
tissue
heart left ventricle
35
tibial nerve
35
kidney
27
tibial artery
23
islet of Langerhans
21
+ See 79 more…
primary cell
endothelial cell of umbilical vein
17
epithelial cell of proximal tubule
7
cell line
Panc1
13
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
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