Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
274
ChIP-seq
89
total RNA-seq
9
WGBS
5
ATAC-seq
5
DNase-seq
2
RRBS
1
FAIRE-seq
Assay category
274
DNA binding
Target of assay
180
histone modification
179
histone
97
broad histone mark
81
narrow histone mark
47
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
406
November, 2017
274
August, 2017
242
October, 2019
165
May, 2021
113
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
25
January, 2019
24
February, 2018
21
June, 2019
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
181
bam
181
fastq
158
bigWig
119
bed narrowPeak
70
tagAlign
33
bed bed3+
32
bigBed narrowPeak
26
bed broadPeak
13
bigBed broadPeak
Organism
267
Homo sapiens
Biosample type
154
tissue
67
in vitro differentiated cells
53
primary cell
Organ
117
connective tissue
94
pancreas
50
adipose tissue
48
liver
26
epithelium
musculature of body
Project
274
AMP
Genome assembly (visualization)
160
hg19
151
GRCh38
Lab
274
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
16
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
month_released!
November, 2018
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
274 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
48
islet of Langerhans
42
subcutaneous abdominal adipose tissue
36
pancreas
14
white adipose tissue
12
+ See 1 more…
in vitro differentiated cells
adipocyte
67
primary cell
skeletal muscle myoblast
15
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
See all biosamples
Download