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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
40
total RNA-seq
26
ATAC-seq
2
Hi-C
Assay category
62
DNA binding
Target of assay
33
histone
33
histone modification
18
broad histone mark
15
narrow histone mark
15
transcription factor
14
control
7
RNA binding protein
6
chromatin remodeller
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
62
bam
49
fastq
48
bed narrowPeak
48
bigWig
21
bigBed narrowPeak
Organism
62
Homo sapiens
Biosample type
31
cell line
24
in vitro differentiated cells
7
tissue
Organ
18
blood
18
bodily fluid
13
epithelium
13
pancreas
9
embryo
7
spleen
Project
62
AMP
Genome assembly (visualization)
48
GRCh38
48
hg19
Lab
62
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
62 results
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ChIP-seq
cell line
GM12878
18
EndoC_BH1
13
in vitro differentiated cells
pancreatic endoderm
9
definitive endodermal cell
3
embryonic stem cell
3
endocrine cell
3
posterior foregut
3
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tissue
spleen
7
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