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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
302
total RNA-seq
196
ChIP-seq
187
DNase-seq
48
single cell RNA-seq
34
ATAC-seq
17
pCHi-C
1
DNAme array
Assay category
196
DNA binding
Target of assay
159
histone
159
histone modification
84
broad histone mark
75
narrow histone mark
20
transcription factor
17
control
9
RNA binding protein
Date released
406
November, 2017
289
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
0
July, 2018
Available data
146
bigWig
143
bed narrowPeak
122
bam
90
tagAlign
23
bigBed narrowPeak
Organism
196
Homo sapiens
Biosample type
152
primary cell
43
in vitro differentiated cells
1
cell line
Organ
12
connective tissue
10
epithelium
10
musculature of body
5
heart
4
pancreas
3
eye
3
kidney
Project
111
AMP
85
T1D
Genome assembly (visualization)
146
hg19
113
GRCh38
Lab
154
Kyle Gaulton, UCSD
42
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
BIOSAMPLE
ASSAY
196 results
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Clear Filters
ChIP-seq
primary cell
monocyte
85
CD8-positive, alpha-beta T cell
33
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
5
+ See 6 more…
in vitro differentiated cells
embryonic stem cell
37
cardiomyocytes
3
pancreatic PP cell
3
cell line
EndoC_BH1
1
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