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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
100
ATAC-seq
99
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
99
DNA binding
Target of assay
64
transcription factor
29
control
27
histone
27
histone modification
27
narrow histone mark
RNA binding protein
16
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
369
November, 2017
288
August, 2017
242
October, 2019
160
May, 2021
115
May, 2019
90
December, 2017
76
April, 2019
63
October, 2018
50
May, 2020
49
November, 2018
42
August, 2021
35
May, 2024
32
December, 2018
32
September, 2018
27
June, 2019
24
February, 2018
19
January, 2019
15
October, 2017
12
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
99
bam
69
bed narrowPeak
69
bigWig
50
tagAlign
49
fastq
42
bigBed narrowPeak
Organism
99
Homo sapiens
Biosample type
60
tissue
39
cell line
Organ
80
liver
13
blood
13
bodily fluid
6
spleen
Project
99
AMP
Genome assembly (visualization)
67
hg19
61
GRCh38
Lab
99
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
4
inconsistent control read length
3
inconsistent control run_type
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
99 results
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Clear Filters
ChIP-seq
tissue
liver
54
spleen
6
cell line
HepG2
26
GM12878
13
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