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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
182
total RNA-seq
165
ChIP-seq
34
ATAC-seq
17
pCHi-C
1
DNAme array
Assay category
165
DNA binding
Target of assay
140
histone
140
histone modification
76
broad histone mark
64
narrow histone mark
16
transcription factor
9
control
5
RNA binding protein
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
123
bigWig
120
bed narrowPeak
91
bam
90
tagAlign
Organism
165
Homo sapiens
Biosample type
121
primary cell
43
in vitro differentiated cells
1
cell line
Organ
4
epithelium
4
pancreas
Project
85
T1D
80
AMP
Genome assembly (visualization)
123
hg19
90
GRCh38
Lab
154
Kyle Gaulton, UCSD
11
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
month_released!
January, 2021
BIOSAMPLE
ASSAY
165 results
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Clear Filters
ChIP-seq
primary cell
monocyte
85
CD8-positive, alpha-beta T cell
33
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
1
in vitro differentiated cells
embryonic stem cell
37
cardiomyocytes
3
pancreatic PP cell
3
cell line
EndoC_BH1
1
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