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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
186
ChIP-seq
30
total RNA-seq
22
ATAC-seq
10
DNase-seq
5
Hi-C
4
pCHi-C
1
FAIRE-seq
Assay category
186
DNA binding
Target of assay
195
histone
195
histone modification
140
narrow histone mark
broad histone mark
39
control
7
recombinant protein
7
transcription factor
Date released
356
November, 2017
187
August, 2017
186
October, 2019
89
May, 2021
79
December, 2017
70
November, 2018
62
May, 2019
55
October, 2018
50
May, 2020
43
April, 2019
34
August, 2021
34
December, 2018
23
June, 2019
21
January, 2019
20
May, 2024
16
February, 2018
15
September, 2018
8
February, 2021
7
November, 2019
6
September, 2017
5
October, 2017
3
March, 2020
Available data
164
bam
124
bed narrowPeak
124
bigWig
49
tagAlign
20
bigBed narrowPeak
1
tagAlign bed3+
Organism
186
Homo sapiens
Biosample type
155
tissue
19
cell line
12
primary cell
Organ
81
brain
29
limb
19
nerve
18
kidney
17
blood vessel
17
vasculature
12
epithelium
9
artery
9
pancreas
8
vein
4
gonad
4
ovary
2
eye
2
heart
2
liver
1
connective tissue
lymph node
1
pituitary gland
Project
186
AMP
Genome assembly (visualization)
126
GRCh38
126
hg19
Lab
186
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
organ_slims!
lymph node
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
186 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
20
tibial nerve
19
tibial artery
9
kidney
4
superior frontal gyrus
4
+ See 77 more…
cell line
Panc1
9
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
primary cell
endothelial cell of umbilical vein
8
epithelial cell of proximal tubule
4
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