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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
total RNA-seq
73
ATAC-seq
39
ChIP-seq
8
DNase-seq
4
pCHi-C
2
single cell RNA-seq
1
RRBS
Assay category
39
DNA binding
Target of assay
23
histone
23
histone modification
14
broad histone mark
10
control
9
narrow histone mark
6
transcription factor
2
RNA binding protein
Date released
25
October, 2019
6
February, 2021
5
May, 2019
3
June, 2019
Available data
37
bam
27
bed narrowPeak
27
bigWig
23
bigBed narrowPeak
6
tagAlign
Organism
39
Homo sapiens
Biosample type
30
tissue
6
cell line
3
primary cell
Organ
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
39
AMP
Genome assembly (visualization)
27
GRCh38
27
hg19
Lab
39
AMP-T2D consortium
organ_slims!
liver
BIOSAMPLE
ASSAY
39 results
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ChIP-seq
tissue
tibial artery
23
coronary artery
5
islet of Langerhans
2
cell line
smooth muscle cell of the coronary artery
6
primary cell
retinal pigment epithelial cell
3
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