Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 134ChIP-seq
  • 93single cell RNA-seq
  • 72total RNA-seq
  • 47ATAC-seq
  • 30DNase-seq
  • 8WGBS
  • 3Hi-C
  • 3pCHi-C
  • 2RRBS
  • 1small RNA-seq
Assay category
  • 134DNA binding
Target of assay
  • 97histone
  • 97histone modification
  • 57broad histone mark
  • 40narrow histone mark
  • 20control
  • 17transcription factor
  • 11RNA binding protein
Date released
  • 57April, 2019
  • 40May, 2024
  • 21May, 2019
  • 6February, 2021
  • 5June, 2019
  • 5October, 2019
Available data
  • 114bed narrowPeak
  • 114bigWig
  • 93bam
  • 64bigBed narrowPeak
  • 6tagAlign
Organism
  • 134Homo sapiens
Biosample type
  • 123tissue
  • 6cell line
  • 5primary cell
Organ
  • 552liver
  • 218brain
  • 218pancreas
  • 153connective tissue
  • 134heart
  • 129epithelium
  • 102vasculature
  • 99blood vessel
  • 73adipose tissue
  • 66limb
  • 60blood
  • 60bodily fluid
  • 52kidney
  • 39musculature of body
  • 35nerve
  • 34artery
  • 22embryo
  • 20spleen
  • 17vein
  • 5eye
  • 4gonad
  • 4ovary
  • 1lymph node
  • 1pituitary gland
Project
  • 134AMP
Genome assembly (visualization)
  • 113GRCh38
  • 74hg19
Lab
  • 94AMP-T2D consortium
  • 40Patrick T. Ellinor, Broad
Audit category:
  • 4inconsistent ontology term
BIOSAMPLE
ASSAY

134 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
tissue
left cardiac atrium40
heart left ventricle35
heart14
heart right ventricle13
right atrium auricular region10
cell line
smooth muscle cell of the coronary artery6
primary cell
cardiac fibroblast5
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego