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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1673
ChIP-seq
1391
total RNA-seq
425
ATAC-seq
358
single cell RNA-seq
211
DNase-seq
87
RNA microarray
75
WGBS
74
snATAC-seq
52
pCHi-C
30
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
GRO-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
DNA methylation
Date released
1
January, 2018
1
May, 2021
Available data
1
bigWig
1
fastq
Organism
2
Homo sapiens
Biosample type
in vitro differentiated cells
1
primary cell
1
stem cell
Project
2
AMP
Genome assembly (visualization)
1
hg18
Lab
2
AMP-T2D consortium
biosample_type!
in vitro differentiated cells
files.file_type!
xls
lab.title!
Xin Sun, UCSD
BIOSAMPLE
ASSAY
2 results
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DNAme array
GRO-seq
primary cell
monocyte
1
stem cell
hESC
1
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