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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1777
ChIP-seq
1527
total RNA-seq
467
ATAC-seq
369
single cell RNA-seq
212
DNase-seq
87
RNA microarray
84
snATAC-seq
75
WGBS
57
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
DNA methylation
Date released
87
February, 2021
2
December, 2019
1
August, 2021
1
May, 2021
Available data
84
txt
5
tsv
Organism
90
Homo sapiens
Biosample type
90
tissue
1
primary cell
Organ
84
bone element
5
kidney
1
adipose tissue
1
connective tissue
1
epithelium
Project
91
AMP
Lab
91
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
2
audit script error
files.file_type!
xls
month_released!
December, 2017
BIOSAMPLE
ASSAY
91 results
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RNA microarray
snDrop-seq
DNAme array
tissue
bone element
84
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
kidney interstitium
1
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primary cell
monocyte
1
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