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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1536
ChIP-seq
1527
total RNA-seq
531
ATAC-seq
366
single cell RNA-seq
DNase-seq
87
RNA microarray
84
snATAC-seq
75
WGBS
57
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
5
MeRIP-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
DNA methylation
Date released
3
February, 2021
1
May, 2021
Available data
3
tsv
Organism
4
Homo sapiens
Biosample type
3
tissue
1
primary cell
Organ
3
kidney
Project
4
AMP
Lab
4
AMP-T2D consortium
assay_title!
CRISPR genome editing followed by sgRNA sequencing
DNase-seq
target.investigated_as!
control
BIOSAMPLE
ASSAY
4 results
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snDrop-seq
DNAme array
tissue
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
primary cell
monocyte
1
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