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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1317
total RNA-seq
1258
ChIP-seq
418
ATAC-seq
299
single cell RNA-seq
86
RNA microarray
84
snATAC-seq
51
pCHi-C
27
WGBS
23
Hi-C
18
small RNA-seq
15
RRBS
5
GRO-seq
4
FAIRE-seq
4
MeRIP-seq
3
DNase-seq
3
snDrop-seq
2
Capture-C
1
CRISPR RNA-seq
CRISPRi RNA-seq
1
DNAme array
Assay category
3
DNA accessibility
Date released
3
August, 2017
Available data
191
bam
191
bed narrowPeak
191
bigBed narrowPeak
191
bigWig
189
bed broadPeak
bigBed broadPeak
187
bed bed3+
12
fastq
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Organ
epithelium
2
kidney
1
liver
1
pancreas
Project
3
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
3
AMP-T2D consortium
assay_title!
CRISPRi RNA-seq
biosample_type!
cell line
files.file_type!
bigBed broadPeak
organ_slims!
epithelium
BIOSAMPLE
ASSAY
3 results
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DNase-seq
tissue
islet of Langerhans
1
right lobe of liver
1
primary cell
skeletal muscle myoblast
1
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