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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1183
total RNA-seq
1094
ChIP-seq
376
ATAC-seq
297
single cell RNA-seq
191
DNase-seq
RNA microarray
84
snATAC-seq
42
pCHi-C
27
WGBS
19
Hi-C
18
small RNA-seq
15
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
1
DNAme array
Assay category
191
DNA accessibility
Date released
173
June, 2019
9
November, 2018
4
August, 2017
4
October, 2019
1
November, 2020
Available data
190
bam
190
bed narrowPeak
190
bigBed narrowPeak
190
bigWig
188
bed broadPeak
188
bigBed broadPeak
187
bed bed3+
11
fastq
Organism
191
Homo sapiens
Biosample type
178
tissue
13
primary cell
1
cell line
1
in vitro differentiated cells
Organ
80
kidney
36
limb
33
musculature of body
32
brain
30
heart
epithelium
18
ureter
11
vasculature
9
blood vessel
8
connective tissue
7
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
191
AMP
Genome assembly (visualization)
188
GRCh38
173
hg19
Lab
191
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
assay_title!
RNA microarray
organ_slims!
epithelium
BIOSAMPLE
ASSAY
191 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 40 more…
primary cell
cardiac fibroblast
3
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain pericyte
1
+ See 5 more…
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