Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
274
ChIP-seq
243
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
snATAC-seq
47
WGBS
28
DNase-seq
17
pCHi-C
10
Hi-C
9
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
28
DNA accessibility
Date released
21
June, 2019
4
October, 2019
2
August, 2017
1
November, 2020
Available data
26
bam
26
bed narrowPeak
26
bigBed narrowPeak
26
bigWig
25
bed broadPeak
25
bigBed broadPeak
24
bed bed3+
1
fastq
Organism
28
Homo sapiens
Biosample type
151
tissue
28
primary cell
2
cell line
1
in vitro differentiated cells
Organ
18
epithelium
12
kidney
6
connective tissue
6
vasculature
5
brain
4
blood vessel
heart
2
liver
2
vein
1
eye
1
musculature of body
Project
28
AMP
Genome assembly (visualization)
24
GRCh38
20
hg19
Lab
28
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
snATAC-seq
organ_slims!
adrenal gland
heart
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
primary cell
kidney tubule cell
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
skeletal muscle myoblast
2
+ See 17 more…
See all biosamples
Download