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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
264
ChIP-seq
241
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
19
DNase-seq
17
pCHi-C
10
Hi-C
7
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
20
DNA accessibility
Date released
14
June, 2019
3
October, 2019
2
August, 2017
1
November, 2020
Available data
20
bam
20
bed narrowPeak
20
bigBed narrowPeak
20
bigWig
18
bed broadPeak
18
bigBed broadPeak
17
bed bed3+
1
fastq
1
tar
Organism
20
Homo sapiens
Biosample type
113
tissue
20
primary cell
1
cell line
1
in vitro differentiated cells
Organ
19
epithelium
kidney
7
vasculature
6
connective tissue
5
blood vessel
5
brain
3
heart
3
vein
2
liver
1
eye
1
musculature of body
Project
20
AMP
Genome assembly (visualization)
19
hg19
17
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
kidney
BIOSAMPLE
ASSAY
20 results
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DNase-seq
FAIRE-seq
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
1
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
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