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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
177
DNase-seq
50
ChIP-seq
4
ATAC-seq
2
Capture-C
1
Hi-C
1
pCHi-C
1
snATAC-seq
Assay category
177
DNA accessibility
1
3D chromatin structure
Date released
163
June, 2019
9
November, 2018
6
October, 2019
Available data
181
bigWig
180
bam
180
bed narrowPeak
180
bigBed narrowPeak
178
bed bed3+
178
bed broadPeak
178
bigBed broadPeak
17
hic
16
bedpe bed3+
12
fastq
1
bedpe
1
hdf5
Organism
178
Homo sapiens
Biosample type
176
tissue
primary cell
2
cell line
Organ
68
kidney
36
limb
32
musculature of body
27
brain
27
heart
18
ureter
8
pancreas
5
blood vessel
5
vasculature
4
artery
3
eye
3
liver
2
adipose tissue
2
connective tissue
2
nerve
1
spleen
Project
178
AMP
Genome assembly (visualization)
178
GRCh38
162
hg19
Lab
178
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
1
inconsistent assembly
biosample_type!
primary cell
BIOSAMPLE
ASSAY
178 results
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DNase-seq
Hi-C
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 39 more…
cell line
Panc1
1
1
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