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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
404
total RNA-seq
112
ChIP-seq
35
DNase-seq
7
ATAC-seq
7
WGBS
6
Hi-C
5
RRBS
5
small RNA-seq
3
pCHi-C
1
RNA microarray
1
single cell RNA-seq
1
snATAC-seq
Assay category
35
DNA accessibility
6
3D chromatin structure
Date released
34
June, 2019
4
July, 2019
2
March, 2020
1
November, 2018
Available data
35
bam
35
bed bed3+
35
bed broadPeak
35
bed narrowPeak
35
bigBed broadPeak
35
bigBed narrowPeak
35
bigWig
2
bedpe bed3+
2
hic
1
fastq
Organism
41
Homo sapiens
Biosample type
40
tissue
1
primary cell
Organ
82
kidney
40
limb
39
musculature of body
35
brain
33
heart
27
epithelium
18
ureter
17
pancreas
16
vasculature
14
blood vessel
10
connective tissue
10
liver
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
41
AMP
Genome assembly (visualization)
37
hg19
35
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
41 results
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DNase-seq
Hi-C
tissue
muscle of arm
17
muscle of leg
13
gastrocnemius medialis
4
omental fat pad
2
psoas muscle
2
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primary cell
skeletal muscle cell
1
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