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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
130
total RNA-seq
84
RNA microarray
59
ChIP-seq
42
ATAC-seq
9
pCHi-C
9
single cell RNA-seq
6
MeRIP-seq
5
Hi-C
4
DNase-seq
2
Capture-C
2
RRBS
1
STARR-seq
Assay category
4
DNA accessibility
Target of assay
3
control
3
nucleotide modification
Date released
84
February, 2021
6
November, 2020
4
June, 2019
Available data
84
txt
4
bam
4
bed bed3+
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
4
bigWig
Organism
94
Homo sapiens
Biosample type
85
tissue
6
cell line
3
primary cell
Organ
84
bone element
7
epithelium
6
pancreas
1
connective tissue
1
heart
1
kidney
1
limb
1
musculature of body
1
vasculature
Project
94
AMP
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
88
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
94
inconsistent ontology term
2
audit script error
BIOSAMPLE
ASSAY
94 results
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RNA microarray
MeRIP-seq
DNase-seq
tissue
bone element
84
muscle of leg
1
cell line
EndoC_BH1
6
primary cell
cardiac fibroblast
1
epithelial cell of proximal tubule
1
smooth muscle cell of the brain vasculature
1
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