Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
825
ChIP-seq
211
total RNA-seq
133
single cell RNA-seq
47
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
17
DNA methylation
12
DNA accessibility
Date released
16
November, 2018
7
August, 2017
6
February, 2021
Available data
227
bam
226
bigWig
209
bed narrowPeak
209
bigBed narrowPeak
206
bed broadPeak
206
bigBed broadPeak
204
bed bed3+
41
zippedFastqFolder
29
fastq
17
bed bedMethyl
17
bigBed bedMethyl
6
tsv
Organism
29
Homo sapiens
Biosample type
20
tissue
7
primary cell
1
cell line
1
in vitro differentiated cells
Organ
13
pancreas
6
epithelium
5
connective tissue
5
liver
4
adipose tissue
3
spleen
2
brain
Project
23
AMP
6
HPAP
Genome assembly (visualization)
20
GRCh38
12
hg19
Lab
23
AMP-T2D consortium
6
Klaus Kaestner, Upenn
month_released!
September, 2018
BIOSAMPLE
ASSAY
29 results
search-icon
table-tab-icon
Clear Filters
WGBS
DNase-seq
tissue
body of pancreas
2
2
adipose tissue
3
liver
1
2
spleen
2
1
brain
2
+ See 4 more…
primary cell
pancreatic alpha cell
6
skeletal muscle myoblast
1
cell line
HepG2
1
in vitro differentiated cells
adipocyte
1
See all biosamples
Download