Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1031
total RNA-seq
907
ChIP-seq
260
ATAC-seq
180
single cell RNA-seq
178
DNase-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
0
shRNA RNA-seq
Assay category
178
DNA accessibility
16
Transcription
Date released
163
June, 2019
16
July, 2019
9
November, 2018
4
October, 2019
2
August, 2017
Available data
193
bam
193
bigWig
177
bed narrowPeak
177
bigBed narrowPeak
176
bed bed3+
176
bed broadPeak
176
bigBed broadPeak
16
tsv
10
fastq
Organism
194
Homo sapiens
Biosample type
194
tissue
33
primary cell
3
cell line
1
in vitro differentiated cells
Organ
69
kidney
36
limb
33
musculature of body
31
brain
28
heart
18
ureter
9
pancreas
7
liver
5
blood vessel
5
vasculature
4
adipose tissue
4
artery
4
connective tissue
3
eye
2
nerve
1
spleen
Project
194
AMP
Genome assembly (visualization)
193
GRCh38
177
hg19
Lab
194
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
194 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
small RNA-seq
tissue
heart
18
1
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 46 more…
See all biosamples
Download