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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
33
DNase-seq
6
Hi-C
6
total RNA-seq
5
RRBS
2
small RNA-seq
1
ATAC-seq
1
WGBS
1
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
Assay category
33
DNA accessibility
3
Transcription
Date released
33
June, 2019
2
July, 2019
1
May, 2022
Available data
35
bam
35
bigWig
33
bed bed3+
33
bed broadPeak
33
bed narrowPeak
33
bigBed broadPeak
33
bigBed narrowPeak
2
tsv
Organism
36
Homo sapiens
Biosample type
34
tissue
2
primary cell
Organ
146
kidney
124
heart
90
pancreas
89
epithelium
39
brain
36
limb
36
musculature of body
18
ureter
17
vasculature
16
connective tissue
15
blood vessel
10
liver
9
lung
6
artery
5
adipose tissue
4
eye
2
nerve
2
vein
spleen
Project
36
AMP
Genome assembly (visualization)
35
GRCh38
35
hg19
Lab
36
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
spleen
BIOSAMPLE
ASSAY
36 results
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DNase-seq
small RNA-seq
single cell RNA-seq
tissue
muscle of arm
17
muscle of leg
13
skeletal muscle tissue
1
1
forelimb muscle
1
hindlimb muscle
1
primary cell
skeletal muscle cell
1
skeletal muscle satellite cell
1
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