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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
330
ChIP-seq
174
single cell RNA-seq
125
ATAC-seq
121
total RNA-seq
87
RNA microarray
27
WGBS
27
snATAC-seq
21
pCHi-C
17
DNase-seq
5
Hi-C
4
MeRIP-seq
3
snDrop-seq
2
RRBS
Assay category
174
Transcription
17
DNA accessibility
Date released
106
August, 2021
47
September, 2023
16
June, 2019
9
April, 2020
6
February, 2021
3
May, 2023
1
August, 2017
1
December, 2019
1
February, 2023
1
May, 2022
Available data
103
tsv
16
bam
16
bed bed3+
16
bed broadPeak
16
bed narrowPeak
16
bigBed broadPeak
16
bigBed narrowPeak
16
bigWig
13
txt
6
csv
Organism
191
Homo sapiens
Biosample type
191
tissue
94
primary cell
2
in vitro differentiated cells
Organ
95
heart
65
kidney
10
brain
9
lung
6
blood vessel
6
vasculature
2
artery
2
liver
2
pancreas
1
musculature of body
Project
135
AMP
47
KPMP
9
LungMap
Genome assembly (visualization)
179
GRCh38
hg19
Lab
124
AMP-T2D consortium
47
KPMP
11
Katalin Susztak, Upenn
9
Xin Sun, UCSD
Audit category:
5
audit script error
assembly!
hg19
month_released!
October, 2019
BIOSAMPLE
ASSAY
191 results
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single cell RNA-seq
DNase-seq
tissue
kidney
64
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
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