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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 566ChIP-seq
  • 270ATAC-seq
  • 263single cell RNA-seq
  • 248total RNA-seq
  • 87RNA microarray
  • 83snATAC-seq
  • 75WGBS
  • 53pCHi-C
  • 26DNase-seq
  • 10MeRIP-seq
  • 7Hi-C
  • 5GRO-seq
  • 5STARR-seq
  • 3CRISPR genome editing followed by DNA sequencing
  • 3snDrop-seq
  • 2Capture-C
  • 2HiChIP
  • 2RRBS
  • 1CRISPR RNA-seq
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1CRISPRi RNA-seq
  • 1DNAme array
  • 1MPRA
  • 1shRNA RNA-seq
  • 1siRNA RNA-seq
  • 1whole genome sequencing assay
Assay category
  • 26DNA accessibility
Date released
  • 23June, 2019
  • 2October, 2019
  • 1August, 2017
Available data
  • 23bam
  • 23bed bed3+
  • 23bed broadPeak
  • 23bed narrowPeak
  • 23bigBed broadPeak
  • 23bigBed narrowPeak
  • 23bigWig
Organism
  • 26Homo sapiens
Biosample type
  • 17tissue
  • 9primary cell
Organ
  • 10brain
  • 9kidney
  • 8epithelium
  • 3heart
  • 2pancreas
  • 1blood vessel
  • 1connective tissue
  • 1liver
  • 1vasculature
Project
  • 26AMP
Genome assembly (visualization)
  • 207GRCh38
  • hg19
Lab
  • 26AMP-T2D consortium
assembly!
  • hg19
BIOSAMPLE
ASSAY

26 results

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Clear Filters
DNase-seq
tissue
body of pancreas2
heart2
Ammon's horn1
caudate nucleus1
cerebellar cortex1
primary cell
kidney tubule cell3
glomerular visceral epithelial cell2
kidney glomerular epithelial cell2
cardiac fibroblast1
kidney capillary endothelial cell1
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