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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1277total RNA-seq
  • 1266ChIP-seq
  • 234ATAC-seq
  • 207DNase-seq
  • 106single cell RNA-seq
  • 18small RNA-seq
  • 17WGBS
  • 2Hi-C
Assay category
  • 207DNA accessibility
Date released
  • 187June, 2019
  • 9November, 2018
  • 8October, 2019
  • 2August, 2017
  • 1November, 2020
Available data
  • 207bam
  • 207bed narrowPeak
  • 207bigBed narrowPeak
  • 207bigWig
  • 205bed broadPeak
  • 205bigBed broadPeak
  • 204bed bed3+
  • 11fastq
Organism
  • 207Homo sapiens
Biosample type
  • 177tissue
  • 27primary cell
  • 2cell line
  • 1in vitro differentiated cells
Organ
  • 79kidney
  • 36limb
  • 33musculature of body
  • 32brain
  • 30heart
  • 18ureter
  • 17epithelium
  • 11vasculature
  • 9blood vessel
  • 9connective tissue
  • 8pancreas
  • 5liver
  • 4artery
  • 4eye
  • 2adipose tissue
  • 2nerve
  • 2vein
  • 1spleen
Project
  • 207AMP
Genome assembly (visualization)
  • 207GRCh38
  • 186hg19
Lab
  • 207AMP-T2D consortium
Audit category:
  • 4inconsistent ontology term
BIOSAMPLE
ASSAY

207 results

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Clear Filters
DNase-seq
tissue
heart18
muscle of arm17
brain14
kidney13
muscle of leg13
primary cell
cardiac fibroblast3
endothelial cell of umbilical vein2
glomerular visceral epithelial cell2
kidney tubule cell2
astrocyte of the cerebellum1
cell line
Panc11
glomerular visceral epithelial cell1
in vitro differentiated cells
adipocyte1
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