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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1305ChIP-seq
  • 1279total RNA-seq
  • 261ATAC-seq
  • 186DNase-seq
  • 106single cell RNA-seq
  • 27Hi-C
  • 19RRBS
  • 18small RNA-seq
  • 5FAIRE-seq
  • 4pCHi-C
  • 2Capture-C
  • 1snATAC-seq
Assay category
  • 186DNA accessibility
Date released
  • 164June, 2019
  • 9November, 2018
  • 8October, 2019
  • 4August, 2017
  • 1November, 2020
Available data
  • 186bam
  • 186bed narrowPeak
  • 186bigBed narrowPeak
  • 186bigWig
  • 183bed broadPeak
  • 183bigBed broadPeak
  • 181bed bed3+
  • 12fastq
Organism
  • 186Homo sapiens
Biosample type
  • 161tissue
  • 22primary cell
  • 2cell line
  • 1in vitro differentiated cells
Organ
  • 72kidney
  • 36limb
  • 33musculature of body
  • 27heart
  • 22brain
  • 18ureter
  • 11epithelium
  • 10vasculature
  • 8blood vessel
  • 8connective tissue
  • 6pancreas
  • 5liver
  • 4artery
  • 4eye
  • 2adipose tissue
  • 2nerve
  • 2vein
  • 1spleen
Project
  • 186AMP
Genome assembly (visualization)
  • 207GRCh38
  • 186hg19
Lab
  • 186AMP-T2D consortium
Audit category:
  • 4inconsistent ontology term
BIOSAMPLE
ASSAY

186 results

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Clear Filters
DNase-seq
tissue
muscle of arm17
heart16
brain14
kidney13
muscle of leg13
primary cell
cardiac fibroblast2
endothelial cell of umbilical vein2
skeletal muscle myoblast2
astrocyte of the cerebellum1
astrocyte of the hippocampus1
cell line
Panc11
glomerular visceral epithelial cell1
in vitro differentiated cells
adipocyte1
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