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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1305ChIP-seq
  • 1279total RNA-seq
  • 261ATAC-seq
  • 186DNase-seq
  • 106single cell RNA-seq
  • 27Hi-C
  • 19RRBS
  • 18small RNA-seq
  • 5FAIRE-seq
  • 4pCHi-C
  • 2Capture-C
  • 1snATAC-seq
Assay category
  • 186DNA accessibility
Date released
  • 164June, 2019
  • 9November, 2018
  • 8October, 2019
  • 4August, 2017
  • 1November, 2020
Available data
  • 186bam
  • 186bed narrowPeak
  • 186bigBed narrowPeak
  • 186bigWig
  • 183bed broadPeak
  • 183bigBed broadPeak
  • 181bed bed3+
  • 12fastq
Organism
  • 186Homo sapiens
Biosample type
  • 161tissue
  • 22primary cell
  • 2cell line
  • 1in vitro differentiated cells
Organ
  • 72kidney
  • 36limb
  • 33musculature of body
  • 27heart
  • 22brain
  • 18ureter
  • 11epithelium
  • 10vasculature
  • 8blood vessel
  • 8connective tissue
  • 6pancreas
  • 5liver
  • 4artery
  • 4eye
  • 2adipose tissue
  • 2nerve
  • 2vein
  • 1spleen
Project
  • 186AMP
Genome assembly (visualization)
  • 207GRCh38
  • 186hg19
Lab
  • 186AMP-T2D consortium
Audit category:
  • 4inconsistent ontology term
BIOSAMPLE
ASSAY

186 results

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Clear Filters
DNase-seq
tissue
muscle of arm17
heart16
brain14
kidney13
muscle of leg13
renal cortex interstitium11
renal pelvis10
right kidney10
left kidney8
left renal cortex interstitium4
left renal pelvis4
right renal pelvis4
heart left ventricle3
retina3
right renal cortex interstitium3
body of pancreas2
coronary artery2
frontal cortex2
liver2
omental fat pad2
pancreas2
right atrium auricular region2
tibial artery2
tibial nerve2
ascending aorta1
cerebellum (Hemisphere)1
forelimb muscle1
heart right ventricle1
hindlimb muscle1
islet of Langerhans1
left cardiac atrium1
occipital lobe1
right lobe of liver1
spleen1
primary cell
cardiac fibroblast2
endothelial cell of umbilical vein2
skeletal muscle myoblast2
astrocyte of the cerebellum1
astrocyte of the hippocampus1
brain microvascular endothelial cell1
brain pericyte1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
glomerular endothelial cell1
hepatic stellate cell1
hepatocyte1
kidney epithelial cell1
osteoblast1
renal cortical epithelial cell1
retinal pigment epithelial cell1
skeletal muscle cell1
smooth muscle cell of the brain vasculature1
cell line
Panc11
glomerular visceral epithelial cell1
in vitro differentiated cells
adipocyte1
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