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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
254
ChIP-seq
239
total RNA-seq
187
ATAC-seq
180
single cell RNA-seq
56
snATAC-seq
47
WGBS
27
DNase-seq
15
pCHi-C
10
Hi-C
8
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
27
DNA accessibility
Date released
21
June, 2019
4
October, 2019
2
August, 2017
November, 2020
Available data
25
bam
25
bed narrowPeak
25
bigBed narrowPeak
25
bigWig
24
bed broadPeak
24
bigBed broadPeak
23
bed bed3+
1
fastq
Organism
27
Homo sapiens
Biosample type
177
tissue
27
primary cell
2
cell line
1
in vitro differentiated cells
Organ
17
epithelium
11
kidney
5
brain
5
vasculature
4
blood vessel
4
connective tissue
2
heart
2
liver
2
vein
1
eye
1
musculature of body
Project
27
AMP
Genome assembly (visualization)
23
GRCh38
18
hg19
Lab
27
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
month_released!
November, 2020
organ_slims!
bone element
BIOSAMPLE
ASSAY
27 results
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DNase-seq
primary cell
kidney tubule cell
3
cardiac fibroblast
2
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
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