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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
202
DNase-seq
36
ChIP-seq
5
Hi-C
4
ATAC-seq
2
Capture-C
2
pCHi-C
2
total RNA-seq
1
snATAC-seq
Assay category
202
DNA accessibility
Date released
187
June, 2019
9
November, 2018
5
October, 2019
1
November, 2020
Available data
207
bam
207
bed narrowPeak
207
bigBed narrowPeak
207
bigWig
204
bed broadPeak
204
bigBed broadPeak
202
bed bed3+
12
fastq
Organism
202
Homo sapiens
Biosample type
174
tissue
27
primary cell
1
cell line
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
8
connective tissue
7
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
nerve
2
vein
1
spleen
Project
202
AMP
Genome assembly (visualization)
202
GRCh38
179
hg19
Lab
202
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
audit.NOT_COMPLIANT.category!
missing controlled_by
biosample_type!
stem cell
organ_slims!
nerve
BIOSAMPLE
ASSAY
202 results
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Clear Filters
DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 38 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
cell line
Panc1
1
See all biosamples
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