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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
128
ChIP-seq
67
total RNA-seq
53
ATAC-seq
43
DNase-seq
7
Hi-C
6
single cell RNA-seq
3
WGBS
1
RRBS
1
pCHi-C
Assay category
43
DNA accessibility
Date released
39
June, 2019
4
October, 2019
Available data
43
bam
43
bed bed3+
43
bed broadPeak
43
bed narrowPeak
43
bigBed broadPeak
43
bigBed narrowPeak
43
bigWig
Organism
43
Homo sapiens
Biosample type
39
tissue
4
primary cell
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
vein
1
spleen
Project
43
AMP
Genome assembly (visualization)
43
GRCh38
42
hg19
Lab
43
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
organ_slims!
vein
BIOSAMPLE
ASSAY
43 results
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DNase-seq
tissue
muscle of arm
17
muscle of leg
13
coronary artery
2
tibial artery
2
tibial nerve
2
+ See 3 more…
primary cell
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
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