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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
543
total RNA-seq
282
ChIP-seq
97
single cell RNA-seq
72
ATAC-seq
36
DNase-seq
14
WGBS
8
pCHi-C
4
Hi-C
4
small RNA-seq
2
Capture-C
2
RRBS
1
RNA microarray
Assay category
36
DNA accessibility
Date released
33
June, 2019
1
August, 2017
1
November, 2018
1
November, 2020
Available data
36
bam
36
bed broadPeak
36
bed narrowPeak
36
bigBed broadPeak
36
bigBed narrowPeak
36
bigWig
35
bed bed3+
2
fastq
Organism
36
Homo sapiens
Biosample type
29
tissue
6
primary cell
1
in vitro differentiated cells
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
36
AMP
Genome assembly (visualization)
36
GRCh38
33
hg19
Lab
36
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
award.project!
LungMap
organ_slims!
gonad
BIOSAMPLE
ASSAY
36 results
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DNase-seq
tissue
heart
18
heart left ventricle
3
coronary artery
2
omental fat pad
2
right atrium auricular region
2
+ See 2 more…
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
in vitro differentiated cells
adipocyte
1
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