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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1414
total RNA-seq
1331
ChIP-seq
500
ATAC-seq
369
single cell RNA-seq
87
RNA microarray
84
snATAC-seq
74
WGBS
51
pCHi-C
30
Hi-C
21
RRBS
18
small RNA-seq
5
DNase-seq
5
FAIRE-seq
5
GRO-seq
4
MeRIP-seq
3
snDrop-seq
2
Capture-C
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
Assay category
5
DNA accessibility
Date released
3
August, 2017
2
October, 2019
Available data
207
bam
207
bed narrowPeak
207
bigBed narrowPeak
207
bigWig
bed broadPeak
205
bigBed broadPeak
203
bed bed3+
12
fastq
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
tissue
cell line
Organ
2
epithelium
2
kidney
1
liver
1
pancreas
Project
5
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
5
AMP-T2D consortium
biosample_type!
cell line
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
5 results
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DNase-seq
primary cell
kidney glomerular epithelial cell
1
kidney tubule cell
1
skeletal muscle myoblast
1
tissue
islet of Langerhans
1
right lobe of liver
1
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