Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1309
total RNA-seq
1091
ChIP-seq
494
ATAC-seq
329
single cell RNA-seq
205
DNase-seq
87
RNA microarray
84
snATAC-seq
65
WGBS
51
pCHi-C
30
Hi-C
18
small RNA-seq
15
RRBS
5
GRO-seq
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
2
Capture-C
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
Assay category
205
DNA accessibility
Date released
187
June, 2019
9
November, 2018
8
October, 2019
August, 2017
1
November, 2020
Available data
203
bam
203
bed bed3+
203
bed broadPeak
203
bed narrowPeak
203
bigBed broadPeak
203
bigBed narrowPeak
203
bigWig
9
fastq
Organism
205
Homo sapiens
Biosample type
176
tissue
29
primary cell
cell line
Organ
80
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
epithelium
18
ureter
11
vasculature
9
blood vessel
8
connective tissue
6
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
205
AMP
Genome assembly (visualization)
203
GRCh38
180
hg19
Lab
205
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
biosample_type!
cell line
month_released!
August, 2017
September, 2020
BIOSAMPLE
ASSAY
205 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 39 more…
primary cell
cardiac fibroblast
3
kidney tubule cell
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
+ See 17 more…
See all biosamples
Download