Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
494
total RNA-seq
187
ChIP-seq
90
ATAC-seq
70
single cell RNA-seq
53
WGBS
20
DNase-seq
7
Hi-C
6
RRBS
3
small RNA-seq
2
RNA microarray
2
pCHi-C
1
FAIRE-seq
Assay category
20
DNA accessibility
Date released
15
June, 2019
4
October, 2019
1
November, 2018
Available data
18
bam
18
bed bed3+
18
bed broadPeak
18
bed narrowPeak
18
bigBed broadPeak
18
bigBed narrowPeak
18
bigWig
1
fastq
Organism
20
Homo sapiens
Biosample type
18
primary cell
2
tissue
cell line
Organ
80
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
7
pancreas
6
liver
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
20
AMP
Genome assembly (visualization)
18
GRCh38
12
hg19
Lab
20
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
cell line
organ_slims!
artery
BIOSAMPLE
ASSAY
20 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
primary cell
kidney tubule cell
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
brain microvascular endothelial cell
1
+ See 8 more…
tissue
omental fat pad
2
See all biosamples
Download